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BMCBI
2008
138views more  BMCBI 2008»
15 years 2 months ago
Systematic identification of yeast cell cycle transcription factors using multiple data sources
Background: Eukaryotic cell cycle is a complex process and is precisely regulated at many levels. Many genes specific to the cell cycle are regulated transcriptionally and are exp...
Wei-Sheng Wu, Wen-Hsiung Li
BMCBI
2007
111views more  BMCBI 2007»
15 years 1 months ago
CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes
Background: The Complete Arabidopsis Transcript MicroArray (CATMA) initiative combines the efforts of laboratories in eight European countries [1] to deliver gene-specific sequenc...
Gert Sclep, Joke Allemeersch, Robin Liechti, Bj&ou...
WWW
2009
ACM
16 years 2 months ago
Evaluating similarity measures for emergent semantics of social tagging
Social bookmarking systems and their emergent information structures, known as folksonomies, are increasingly important data sources for Semantic Web applications. A key question ...
Benjamin Markines, Ciro Cattuto, Filippo Menczer, ...
WWW
2009
ACM
16 years 2 months ago
How opinions are received by online communities: a case study on amazon.com helpfulness votes
There are many on-line settings in which users publicly express opinions. A number of these offer mechanisms for other users to evaluate these opinions; a canonical example is Ama...
Cristian Danescu-Niculescu-Mizil, Gueorgi Kossinet...
RECOMB
2008
Springer
16 years 2 months ago
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes
The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Sel...