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BMCBI
2007
146views more  BMCBI 2007»
14 years 12 months ago
Spatial location and its relevance for terminological inferences in bio-ontologies
Background: An adequate and expressive ontological representation of biological organisms and their parts requires formal reasoning mechanisms for their relations of physical aggr...
Stefan Schulz, Kornél G. Markó, Udo ...
BMCBI
2007
156views more  BMCBI 2007»
14 years 12 months ago
Large-scale clustering of CAGE tag expression data
Background: Recent analyses have suggested that many genes possess multiple transcription start sites (TSSs) that are differentially utilized in different tissues and cell lines. ...
Kazuro Shimokawa, Yuko Okamura-Oho, Takio Kurita, ...
BMCBI
2007
135views more  BMCBI 2007»
14 years 12 months ago
RECOVIR: An application package to automatically identify some single stranded RNA viruses using capsid protein residues that un
Background: Most single stranded RNA (ssRNA) viruses mutate rapidly to generate large number of strains having highly divergent capsid sequences. Accurate strain recognition in un...
Dianhui Zhu, George E. Fox, Sugoto Chakravarty
BMCBI
2008
130views more  BMCBI 2008»
14 years 12 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
COMCOM
2008
84views more  COMCOM 2008»
14 years 12 months ago
SecureStream: An intrusion-tolerant protocol for live-streaming dissemination
Peer-to-peer (P2P) dissemination systems are vulnerable to attacks that may impede nodes from receiving data in which they are interested. The same properties that lead P2P system...
Maya Haridasan, Robbert van Renesse