Abstract. We present two algorithms for computing the quartet distance between trees of arbitrary degree. The quartet distance between two unrooted evolutionary trees is the number...
Chris Christiansen, Thomas Mailund, Christian N. S...
We describe an algorithm for comparing two RNA secondary structures coded in the form of trees that introduces two novel operations, called node fusion and edge fusion, besides the...
Reconciliation between a set of gene trees and a species tree is the most commonly used approach to infer the duplication and loss events in the evolution of gene families, given a...
Nearest neighbour search (NNS) is an old problem that is of practical importance in a number of fields. It involves finding, for a given point q, called the query, one or more po...
For a set of rooted, unordered, distinctly leaf-labeled trees, the NP-hard maximum agreement subtree problem (MAST) asks for a tree contained (up to isomorphism or homeomorphism) i...
Anders Dessmark, Jesper Jansson, Andrzej Lingas, E...