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BMCBI
2010
198views more  BMCBI 2010»
14 years 10 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
BMCBI
2008
201views more  BMCBI 2008»
14 years 10 months ago
A copula method for modeling directional dependence of genes
Background: Genes interact with each other as basic building blocks of life, forming a complicated network. The relationship between groups of genes with different functions can b...
Jong-Min Kim, Yoon-Sung Jung, Engin A. Sungur, Kap...
BMCBI
2006
163views more  BMCBI 2006»
14 years 10 months ago
Ensemble attribute profile clustering: discovering and characterizing groups of genes with similar patterns of biological featur
Background: Ensemble attribute profile clustering is a novel, text-based strategy for analyzing a userdefined list of genes and/or proteins. The strategy exploits annotation data ...
J. R. Semeiks, A. Rizki, Mina J. Bissell, I. Saira...
ECCC
2006
88views more  ECCC 2006»
14 years 10 months ago
Hardness of Directed Routing with Congestion
Given a graph G and a collection of source-sink pairs in G, what is the least integer c such that each source can be connected by a path to its sink, with at most c paths going th...
Julia Chuzhoy, Sanjeev Khanna
CORR
2007
Springer
126views Education» more  CORR 2007»
14 years 10 months ago
Optimal Throughput-Diversity-Delay Tradeoff in MIMO ARQ Block-Fading Channels
In this paper, we consider an automatic-repeat-request (ARQ) retransmission protocol signaling over a block-fading multiple-input, multiple-output (MIMO) channel. Unlike previous ...
Allen Chuang, Albert Guillen i Fabregas, Lars K. R...