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» Re-imagining the first year of computing
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BMCBI
2006
114views more  BMCBI 2006»
15 years 1 months ago
Impact of RNA structure on the prediction of donor and acceptor splice sites
Background: gene identification in genomic DNA sequences by computational methods has become an important task in bioinformatics and computational gene prediction tools are now es...
Sayed-Amir Marashi, Changiz Eslahchi, Hamid Pezesh...
ICPPW
2009
IEEE
14 years 11 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
WWW
2011
ACM
14 years 8 months ago
Counting triangles and the curse of the last reducer
The clustering coefficient of a node in a social network is a fundamental measure that quantifies how tightly-knit the community is around the node. Its computation can be reduce...
Siddharth Suri, Sergei Vassilvitskii
SIGSOFT
2007
ACM
16 years 2 months ago
Reconciling software configuration management and product data management
Product Data Management (PDM) and Software Configuration Management (SCM) are the disciplines of building and controlling the evolution of a complex artifacts; either physical or ...
Germán Vega, Jacky Estublier
IMC
2009
ACM
15 years 7 months ago
Moving beyond end-to-end path information to optimize CDN performance
Replicating content across a geographically distributed set of servers and redirecting clients to the closest server in terms of latency has emerged as a common paradigm for impro...
Rupa Krishnan, Harsha V. Madhyastha, Sridhar Srini...