Sciweavers

73 search results - page 13 / 15
» Reaction Motifs in Metabolic Networks
Sort
View
BMCBI
2004
154views more  BMCBI 2004»
14 years 9 months ago
Computation of elementary modes: a unifying framework and the new binary approach
Background: Metabolic pathway analysis has been recognized as a central approach to the structural analysis of metabolic networks. The concept of elementary (flux) modes provides ...
Julien Gagneur, Steffen Klamt
BMCBI
2006
135views more  BMCBI 2006»
14 years 9 months ago
Correcting ligands, metabolites, and pathways
Background: A wide range of research areas in bioinformatics, molecular biology and medicinal chemistry require precise chemical structure information about molecules and reaction...
Martin A. Ott, Gert Vriend
BMCBI
2007
80views more  BMCBI 2007»
14 years 10 months ago
A network perspective on the topological importance of enzymes and their phylogenetic conservation
Background: A metabolic network is the sum of all chemical transformations or reactions in the cell, with the metabolites being interconnected by enzyme-catalyzed reactions. Many ...
Wei-chung Liu, Wen-hsien Lin, Andrew J. Davis, Fer...
JELIA
2004
Springer
15 years 3 months ago
Towards a Logical Analysis of Biochemical Pathways
Biochemical pathways or networks are generic representations used to model many different types of complex functional and physical interactions in biological systems. Models based ...
Patrick Doherty, Steve Kertes, Martin Magnusson, A...
HYBRID
2004
Springer
15 years 3 months ago
Understanding the Bacterial Stringent Response Using Reachability Analysis of Hybrid Systems
Abstract. In this paper we model coupled genetic and metabolic networks as hybrid systems. The vector fields are multi - affine, i.e., have only product - type nonlinearities to a...
Calin Belta, Peter Finin, Luc C. G. J. M. Habets, ...