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» Reasoning With Weighted Ontologies
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BMCBI
2010
136views more  BMCBI 2010»
14 years 12 months ago
A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles
Background: Many research results show that the biological systems are composed of functional modules. Members in the same module usually have common functions. This is useful inf...
Chia-Hao Chin, Shu-Hwa Chen, Chin-Wen Ho, Ming-Tat...
BMCBI
2008
135views more  BMCBI 2008»
14 years 12 months ago
Knowledge-guided multi-scale independent component analysis for biomarker identification
Background: Many statistical methods have been proposed to identify disease biomarkers from gene expression profiles. However, from gene expression profile data alone, statistical...
Li Chen, Jianhua Xuan, Chen Wang, Ie-Ming Shih, Yu...
BMCBI
2008
123views more  BMCBI 2008»
14 years 12 months ago
Functional module detection by functional flow pattern mining in protein interaction networks
eraction networks. In this abstract, we extend this approach by mining functional flow patterns for the purpose of detecting small-sized modules for specific functions. Methods Our...
Young-Rae Cho, Lei Shi, Aidong Zhang
GEOINFORMATICA
2007
148views more  GEOINFORMATICA 2007»
14 years 11 months ago
Assessing the Certainty of Locations Produced by an Address Geocoding System
Addresses are the most common georeferencing resource people use to communicate to others a location within a city. Urban GIS applications that receive data directly fromcitizens,...
Clodoveu A. Davis, Frederico T. Fonseca
NAR
2006
74views more  NAR 2006»
14 years 11 months ago
NOPdb: Nucleolar Proteome Database
The Nucleolar Proteome Database (NOPdb) archives data on .700 proteins that were identified by multiple mass spectrometry (MS) analyses from highly purified preparations of human ...
Anthony Kar Lun Leung, Laura Trinkle-Mulcahy, Yun ...