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» Reasoning on Association Rules
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BMCBI
2010
127views more  BMCBI 2010»
15 years 24 days ago
Deriving enzymatic and taxonomic signatures of metagenomes from short read data
Background: We propose a method for deriving enzymatic signatures from short read metagenomic data of unknown species. The short read data are converted to six pseudo-peptide cand...
Uri Weingart, Erez Persi, Uri Gophna, David Horn
BMCBI
2007
103views more  BMCBI 2007»
15 years 24 days ago
A comprehensive evaluation of SAM, the SAM R-package and a simple modification to improve its performance
Background: The Significance Analysis of Microarrays (SAM) is a popular method for detecting significantly expressed genes and controlling the false discovery rate (FDR). Recently...
Shunpu Zhang
CACM
2008
101views more  CACM 2008»
15 years 24 days ago
Just say 'A Class Defines a Data Type'
data type and (Java) class, asking about the relationship between them. The same students would also be unlikely to find an answer in a CS1 textbook. Some textbooks might not even ...
Chenglie Hu
CORR
2010
Springer
162views Education» more  CORR 2010»
15 years 24 days ago
Random sampling of lattice paths with constraints, via transportation
We investigate Monte Carlo Markov Chain (MCMC) procedures for the random sampling of some one-dimensional lattice paths with constraints, for various constraints. We will see that...
Lucas Gerin
CORR
2010
Springer
143views Education» more  CORR 2010»
15 years 24 days ago
Efficient and exact sampling of simple graphs with given arbitrary degree sequence
Uniform sampling from graphical realizations of a given degree sequence is a fundamental component in simulation-based measurements of network observables, with applications rangi...
Charo I. Del Genio, Hyunju Kim, Zoltán Toro...