Position-specific scoring matrices have been used extensively to recognize highly conserved protein regions. We present a method for accelerating these searches using a suffix tre...
Abstract. Understanding program behavior is at the foundation of program optimization. Techniques for automatic recognition of program constructs (from now on, computational kernel...
Multi-attribute motion data can be generated in many applications/ devices, such as motion capture devices and animations. It can have dozens of attributes, thousands of rows, and ...
Chuanjun Li, Latifur Khan, Balakrishnan Prabhakara...
Sparse and irregular computations constitute a large fraction of applications in the data-intensive scientific domain. While every effort is made to balance the computational wor...
Guangyu Chen, Konrad Malkowski, Mahmut T. Kandemir...
For regular, sparse, linear systems, like those derived from regular grids, using High Performance Fortran (HPF) for iterative solvers is straightforward. However, for irregular ma...