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APBC
2004
15 years 1 months ago
EMAGEN: An Efficient Approach to Multiple Whole Genome Alignment
Following advances in biotechnology, many new whole genome sequences are becoming available every year. A lot of useful information can be derived from the alignment and compariso...
Jitender S. Deogun, Jingyi Yang, Fangrui Ma
BMCBI
2010
129views more  BMCBI 2010»
14 years 11 months ago
Geoseq: a tool for dissecting deep-sequencing datasets
Background: Datasets generated on deep-sequencing platforms have been deposited in various public repositories such as the Gene Expression Omnibus (GEO), Sequence Read Archive (SR...
James Gurtowski, Anthony Cancio, Hardik Shah, Chay...
BMCBI
2008
77views more  BMCBI 2008»
14 years 11 months ago
SeqAn An efficient, generic C++ library for sequence analysis
Background: The use of novel algorithmic techniques is pivotal to many important problems in life science. For example the sequencing of the human genome [1] would not have been p...
Andreas Döring, David Weese, Tobias Rausch, K...
117
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ALGORITHMICA
2000
161views more  ALGORITHMICA 2000»
14 years 11 months ago
Binary Searching with Nonuniform Costs and Its Application to Text Retrieval
We study the problem of minimizing the expected cost of binary searching for data where the access cost is not fixed and depends on the last accessed element, such as data stored i...
Gonzalo Navarro, Ricardo A. Baeza-Yates, Eduardo F...
85
Voted
CSIE
2009
IEEE
15 years 6 months ago
Multi-directional Demosaicing for Digital Still Cameras
— To obtain the full color image, at least three channels are required at each color location, however the image sensor obtains only the intensity of the brightness and cannot se...
Taeyoung Jung, Siyoung Yang, Jechang Jeong