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BMCBI
2004
196views more  BMCBI 2004»
15 years 2 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
153
Voted
BMCBI
2004
156views more  BMCBI 2004»
15 years 2 months ago
DIALIGN P: Fast pair-wise and multiple sequence alignment using parallel processors
Background: Parallel computing is frequently used to speed up computationally expensive tasks in Bioinformatics. Results: Herein, a parallel version of the multi-alignment program...
Martin Schmollinger, Kay Nieselt, Michael Kaufmann...
BMCBI
2004
150views more  BMCBI 2004»
15 years 2 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz
112
Voted
CORR
2004
Springer
151views Education» more  CORR 2004»
15 years 2 months ago
Finite-Tree Analysis for Constraint Logic-Based Languages: The Complete Unabridged Version
Logic languages based on the theory of rational, possibly infinite, trees have much appeal in that rational trees allow for faster unification (due to the safe omission of the occ...
Roberto Bagnara, Roberta Gori, Patricia M. Hill, E...
170
Voted
SAC
2008
ACM
15 years 2 months ago
Implementing Java modeling language contracts with AspectJ
The Java Modeling Language (JML) is a behavioral interface specification language (BISL) designed for Java. It was developed to improve functional software correctness of Java app...
Henrique Rebêlo, Sérgio Soares, Ricar...