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BMCBI
2007
123views more  BMCBI 2007»
15 years 1 months ago
BIRCH: A user-oriented, locally-customizable, bioinformatics system
Background: Molecular biologists need sophisticated analytical tools which often demand extensive computational resources. While finding, installing, and using these tools can be ...
Brian Fristensky
BMCBI
2007
105views more  BMCBI 2007»
15 years 1 months ago
Extended analysis of benchmark datasets for Agilent two-color microarrays
Background: As part of its broad and ambitious mission, the MicroArray Quality Control (MAQC) project reported the results of experiments using External RNA Controls (ERCs) on fiv...
Kathleen F. Kerr
BMCBI
2005
93views more  BMCBI 2005»
15 years 1 months ago
Two-part permutation tests for DNA methylation and microarray data
Background: One important application of microarray experiments is to identify differentially expressed genes. Often, small and negative expression levels were clipped-off to be e...
Markus Neuhäuser, Tanja Boes, Karl-Heinz J&ou...
TON
2008
87views more  TON 2008»
15 years 1 months ago
Large-scale network parameter configuration using an on-line simulation framework
As the Internet infrastructure grows to support a variety of services, its legacy protocols are being overloaded with new functions such as traffic engineering. Today, operators en...
Tao Ye, Hema Tahilramani Kaur, Shivkumar Kalyanara...
BMCBI
2008
141views more  BMCBI 2008»
15 years 2 months ago
MiRTif: a support vector machine-based microRNA target interaction filter
Background: MicroRNAs (miRNAs) are a set of small non-coding RNAs serving as important negative gene regulators. In animals, miRNAs turn down protein translation by binding to the...
Yuchen Yang, Yu-Ping Wang, Kuo-Bin Li