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POPL
2008
ACM
15 years 10 months ago
Systems biology, models, and concurrency
Models will play a central role in the representation, storage, manipulation, and communication of knowledge in systems biology. Models capable of fulfilling such a role will like...
Walter Fontana
RECOMB
2004
Springer
15 years 10 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
STOC
2006
ACM
174views Algorithms» more  STOC 2006»
15 years 10 months ago
Edge-disjoint paths in Planar graphs with constant congestion
We study the maximum edge-disjoint paths problem in undirected planar graphs: given a graph G and node pairs s1t1, s2t2, . . ., sktk, the goal is to maximize the number of pairs t...
Chandra Chekuri, Sanjeev Khanna, F. Bruce Shepherd
STOC
2004
ACM
94views Algorithms» more  STOC 2004»
15 years 10 months ago
Sublinear algorithms for testing monotone and unimodal distributions
The complexity of testing properties of monotone and unimodal distributions, when given access only to samples of the distribution, is investigated. Two kinds of sublineartime alg...
Tugkan Batu, Ravi Kumar, Ronitt Rubinfeld
STOC
2003
ACM
171views Algorithms» more  STOC 2003»
15 years 10 months ago
Primal-dual meets local search: approximating MST's with nonuniform degree bounds
We present a new bicriteria approximation algorithm for the degree-bounded minimum-cost spanning tree problem: Given an undirected graph with nonnegative edge weights and degree b...
Jochen Könemann, R. Ravi
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