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» Regions: an abstraction for expressing array computation
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APL
1999
ACM
15 years 1 months ago
Regions: an abstraction for expressing array computation
Bradford L. Chamberlain, E. Christopher Lewis, Cal...
BMCBI
2010
106views more  BMCBI 2010»
14 years 9 months ago
A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes
Background: Observed co-expression of a group of genes is frequently attributed to co-regulation by shared transcription factors. This assumption has led to the hypothesis that pr...
Guofeng Meng, Axel Mosig, Martin Vingron
LCPC
2005
Springer
15 years 3 months ago
Applying Data Copy to Improve Memory Performance of General Array Computations
Abstract. Data copy is an important compiler optimization which dynamically rearranges the layout of arrays by copying their elements into local buffers. Traditionally, array copy...
Qing Yi
71
Voted
TCBB
2008
113views more  TCBB 2008»
14 years 9 months ago
Efficient Algorithms for the Computational Design of Optimal Tiling Arrays
The representation of a genome by oligonucleotide probes is a prerequisite for the analysis of many of its basic properties, such as transcription factor binding sites, chromosomal...
Alexander Schliep, Roland Krause
BIRTHDAY
2004
Springer
15 years 1 months ago
On Model Checking Data-Independent Systems with Arrays with Whole-Array Operations
Abstract. We consider programs which are data independent with respect to two type variables X and Y , and can in addition use arrays indexed by X and storing values from Y . We ar...
Ranko Lazic, Thomas Christopher Newcomb, A. W. Ros...