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ICCABS
2011
14 years 5 months ago
CloG: A pipeline for closing gaps in a draft assembly using short reads
— Closing of gaps in draft assemblies using Next Generation Sequencing (NGS) data is becoming increasingly important. In this paper we present CloG, a software pipeline that uses...
Xing Yang, Daniel Medvin, Giri Narasimhan, Deborah...
VIS
2007
IEEE
149views Visualization» more  VIS 2007»
16 years 3 months ago
Time Dependent Processing in a Parallel Pipeline Architecture
Pipeline architectures provide a versatile and efficient mechanism for constructing visualizations, and they have been implemented in numerous libraries and applications over the p...
John Biddiscombe, Berk Geveci, Ken Martin, Kenn...
IPPS
2006
IEEE
15 years 8 months ago
Analysis of checksum-based execution schemes for pipelined processors
The performance requirements for contemporary microprocessors are increasing as rapidly as their number of applications grows. By accelerating the clock, performance can be gained...
Bernhard Fechner
BMCBI
2011
14 years 9 months ago
A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines
Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
Marcin Cieslik, Cameron Mura
DAC
2007
ACM
16 years 2 months ago
Design Methodology for Pipelined Heterogeneous Multiprocessor System
Multiprocessor SoC systems have led to the increasing use of parallel hardware along with the associated software. These approaches have included coprocessor, homogeneous processo...
Seng Lin Shee, Sri Parameswaran