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144
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BMCBI
2010
147views more  BMCBI 2010»
15 years 4 months ago
baySeq: Empirical Bayesian methods for identifying differential expression in sequence count data
Background: High throughput sequencing has become an important technology for studying expression levels in many types of genomic, and particularly transcriptomic, data. One key w...
Thomas J. Hardcastle, Krystyna A. Kelly
174
Voted
BMCBI
2011
14 years 11 months ago
Multivariate analysis of microarray data: differential expression and differential connection
Background: Typical analysis of microarray data ignores the correlation between gene expression values. In this paper we present a model for microarray data which specifically all...
Harri T. Kiiveri
116
Voted
FPCA
1991
15 years 8 months ago
Syntactic Detection of Single-Threading Using Continuations
We tackle the problem of detecting global variables in functional programs. We present syntactic criteria for single-threading which improves upon previous solutions (both syntact...
Pascal Fradet
KDD
2006
ACM
156views Data Mining» more  KDD 2006»
16 years 5 months ago
Discovering significant OPSM subspace clusters in massive gene expression data
Order-preserving submatrixes (OPSMs) have been accepted as a biologically meaningful subspace cluster model, capturing the general tendency of gene expressions across a subset of ...
Byron J. Gao, Obi L. Griffith, Martin Ester, Steve...
ECBS
2006
IEEE
115views Hardware» more  ECBS 2006»
15 years 10 months ago
Supporting Design Patterns with Annotations
Design patterns are an established means for building evolvable and maintainable object-oriented software. However, using them requires the developer’s extensive experience. A w...
Klaus Meffert