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BMCBI
2010
183views more  BMCBI 2010»
15 years 2 months ago
The complexity of gene expression dynamics revealed by permutation entropy
Background: High complexity is considered a hallmark of living systems. Here we investigate the complexity of temporal gene expression patterns using the concept of Permutation En...
Xiaoliang Sun, Yong Zou, Victoria J. Nikiforova, J...
CORR
2011
Springer
183views Education» more  CORR 2011»
14 years 11 months ago
Pattern tree-based XOLAP rollup operator for XML complex hierarchies
—With the rise of XML as a standard for representing business data, XML data warehousing appears as a suitable solution for decision-support applications. In this context, it is ...
Marouane Hachicha, Jérôme Darmont
BMCBI
2007
97views more  BMCBI 2007»
15 years 4 months ago
In situ analysis of cross-hybridisation on microarrays and the inference of expression correlation
Background: Microarray co-expression signatures are an important tool for studying gene function and relations between genes. In addition to genuine biological co-expression, corr...
Tineke Casneuf, Yves Van de Peer, Wolfgang Huber
BMCBI
2007
207views more  BMCBI 2007»
15 years 4 months ago
Analyzing in situ gene expression in the mouse brain with image registration, feature extraction and block clustering
Background: Many important high throughput projects use in situ hybridization and may require the analysis of images of spatial cross sections of organisms taken with cellular lev...
Manjunatha Jagalur, Chris Pal, Erik G. Learned-Mil...
BMCBI
2007
198views more  BMCBI 2007»
15 years 4 months ago
Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation
Time course gene expression experiments are a popular means to infer co-expression. Many methods have been proposed to cluster genes or to build networks based on similarity measu...
Nicola Neretti, Daniel Remondini, Marc Tatar, John...