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BMCBI
2008
130views more  BMCBI 2008»
15 years 4 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
BMCBI
2007
121views more  BMCBI 2007»
15 years 4 months ago
Predicting zinc binding at the proteome level
Background: Metalloproteins are proteins capable of binding one or more metal ions, which may be required for their biological function, for regulation of their activities or for ...
Andrea Passerini, Claudia Andreini, Sauro Menchett...
BMCBI
2006
87views more  BMCBI 2006»
15 years 4 months ago
Phylogeny based discovery of regulatory elements
Background: Algorithms that locate evolutionarily conserved sequences have become powerful tools for finding functional DNA elements, including transcription factor binding sites;...
Jason Gertz, Justin C. Fay, Barak A. Cohen
CCR
2005
76views more  CCR 2005»
15 years 4 months ago
Simplifying the synthesis of internet traffic matrices
A recent paper [8] presented methods for several steps along the road to synthesis of realistic traffic matrices. Such synthesis is needed because traffic matrices are a crucial i...
Matthew Roughan
CVIU
2004
115views more  CVIU 2004»
15 years 4 months ago
Context-dependent segmentation and matching in image databases
The content of an image can be summarized by a set of homogeneous regions in an appropriate feature space. When exact shape is not important, the regions can be represented by sim...
Hayit Greenspan, Guy Dvir, Yossi Rubner