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» RegulonDB: a database on transcriptional regulation in Esche...
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86
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NAR
1998
100views more  NAR 1998»
14 years 10 months ago
RegulonDB: a database on transcriptional regulation in Escherichia coli
RegulonDB is a DataBase that integrates biological knowledge of the mechanisms that regulate the transcription initiation in Escherichia coli, as well as knowledge on the organiza...
Araceli M. Huerta, Heladia Salgado, Denis Thieffry...
96
Voted
BMCBI
2006
181views more  BMCBI 2006»
14 years 10 months ago
The comprehensive updated regulatory network of Escherichia coli K-12
Background: Escherichia coli is the model organism for which our knowledge of its regulatory network is the most extensive. Over the last few years, our project has been collectin...
Heladia Salgado, Alberto Santos-Zavaleta, Socorro ...
103
Voted
BMCBI
2007
165views more  BMCBI 2007»
14 years 10 months ago
Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
Carlos Rodríguez Penagos, Heladia Salgado, ...
144
Voted
NAR
2011
267views Computer Vision» more  NAR 2011»
14 years 4 months ago
EcoCyc: a comprehensive database of Escherichia coli biology
EcoCyc (http://EcoCyc.org) is a comprehensive model organism database for Escherichia coli K-12 MG1655. From the scientific literature, EcoCyc captures the functions of individual...
Ingrid M. Keseler, Julio Collado-Vides, Alberto Sa...
79
Voted
BMCBI
2004
111views more  BMCBI 2004»
14 years 10 months ago
Aggregation of topological motifs in the Escherichia coli transcriptional regulatory network
Background: Transcriptional regulation of cellular functions is carried out through a complex network of interactions among transcription factors and the promoter regions of genes...
Radu Dobrin, Qasim K. Beg, Albert-Lászl&oac...