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BMCBI
2010
155views more  BMCBI 2010»
14 years 11 months ago
A bi-ordering approach to linking gene expression with clinical annotations in gastric cancer
Background: In the study of cancer genomics, gene expression microarrays, which measure thousands of genes in a single assay, provide abundant information for the investigation of...
Fan Shi, Christopher Leckie, Geoff MacIntyre, Izha...
BMCBI
2008
118views more  BMCBI 2008»
14 years 11 months ago
PseudoGeneQuest - Service for identification of different pseudogene types in the human genome
Background: Pseudogenes, nonfunctional copies of genes, evolve fast due the lack of evolutionary pressures and thus appear in several different forms. PseudoGeneQuest is an online...
Csaba P. Ortutay, Mauno Vihinen
BMCBI
2006
117views more  BMCBI 2006»
14 years 11 months ago
SigFlux: A novel network feature to evaluate the importance of proteins in signal transduction networks
Background: Measuring each protein's importance in signaling networks helps to identify the crucial proteins in a cellular process, find the fragile portion of the biology sy...
Wei Liu, Dong Li, Jiyang Zhang, Yunping Zhu, Fuchu...
BMCBI
2006
178views more  BMCBI 2006»
14 years 11 months ago
MannDB - A microbial database of automated protein sequence analyses and evidence integration for protein characterization
Background: MannDB was created to meet a need for rapid, comprehensive automated protein sequence analyses to support selection of proteins suitable as targets for driving the dev...
Carol L. Ecale Zhou, Marisa Lam, Jason Smith, Adam...
ICDM
2010
IEEE
276views Data Mining» more  ICDM 2010»
14 years 9 months ago
Accelerating Dynamic Time Warping Subsequence Search with GPUs and FPGAs
Many time series data mining problems require subsequence similarity search as a subroutine. While this can be performed with any distance measure, and dozens of distance measures ...
Doruk Sart, Abdullah Mueen, Walid A. Najjar, Eamon...