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BMCBI
2006
164views more  BMCBI 2006»
14 years 11 months ago
Evaluation of clustering algorithms for gene expression data
Background: Cluster analysis is an integral part of high dimensional data analysis. In the context of large scale gene expression data, a filtered set of genes are grouped togethe...
Susmita Datta, Somnath Datta
BMCBI
2006
140views more  BMCBI 2006»
14 years 11 months ago
SNP-PHAGE - High throughput SNP discovery pipeline
Background: Single nucleotide polymorphisms (SNPs) as defined here are single base sequence changes or short insertion/deletions between or within individuals of a given species. ...
Lakshmi K. Matukumalli, John J. Grefenstette, Davi...
CLUSTER
2006
IEEE
14 years 11 months ago
Performance of parallel communication and spawning primitives on a Linux cluster
The Linux cluster considered in this paper, formed from shuttle box XPC nodes with 2 GHz Athlon processors connected by dual Gb Ethernet switches, is relatively easily constructed...
David J. Johnston, Martin Fleury, Michael Lincoln,...
CPHYSICS
2006
128views more  CPHYSICS 2006»
14 years 11 months ago
MOMDIS: a Glauber model computer code for knockout reactions
A computer program is described to calculate momentum distributions in stripping and diffraction dissociation reactions. A Glauber model is used with the scattering wavefunctions ...
C. A. Bertulani, A. Gade
BMCBI
2007
215views more  BMCBI 2007»
14 years 11 months ago
Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregres
Background: Causal networks based on the vector autoregressive (VAR) process are a promising statistical tool for modeling regulatory interactions in a cell. However, learning the...
Rainer Opgen-Rhein, Korbinian Strimmer