52 search results - page 2 / 11 » Repeat-aware Comparative Genome Assembly |
93
Voted
CAINE
2008
14 years 11 months ago
2008
Assembly is an NP-Hard problem, which involves comparing fragments that have a time complexity of O(n2 ). This paper presents a parallel approach for sequence assembly. The parall...
WABI
2001
Springer
15 years 1 months ago
2001
Springer
Using current technology, large consecutive stretches of DNA (such as whole chromosomes) are usually assembled from short fragments obtained by shotgun sequencing, or from fragment...
68
Voted
BMCBI
2006
14 years 9 months ago
2006
Background: Automatic annotation of sequenced eukaryotic genomes integrates a combination of methodologies such as ab-initio methods and alignment of homologous genes and/or prote...
BMCBI
2010
14 years 9 months ago
2010
Background: There has been a trend in increasing the phylogenetic scope of genome sequencing without finishing the sequence of the genome. Increasing numbers of genomes are being ...
81
Voted
GCB
2004
Springer
15 years 2 months ago
2004
Springer
: To facilitate research in comparative genomics, sequencing projects are increasingly aimed at assembling the genomes of closely related organisms. Given two incomplete assemblies...