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BMCBI
2007
202views more  BMCBI 2007»
14 years 9 months ago
ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
Background: Protein interactions support cell organization and mediate its response to any specific stimulus. Recent technological advances have produced large data-sets that aim ...
Massimo Bernaschi, Filippo Castiglione, Alessandra...
ASMTA
2008
Springer
167views Mathematics» more  ASMTA 2008»
14 years 11 months ago
Perfect Simulation of Stochastic Automata Networks
The solution of continuous and discrete-time Markovian models is still challenging mainly when we model large complex systems, for example, to obtain performance indexes of paralle...
Paulo Fernandes, Jean-Marc Vincent, Thais Webber
BMCBI
2010
259views more  BMCBI 2010»
14 years 4 months ago
Rule-based spatial modeling with diffusing, geometrically constrained molecules
Background: We suggest a new type of modeling approach for the coarse grained, particle-based spatial simulation of combinatorially complex chemical reaction systems. In our appro...
Gerd Gruenert, Bashar Ibrahim, Thorsten Lenser, Ma...
JUCS
2010
215views more  JUCS 2010»
14 years 4 months ago
A Multidisciplinary Survey of Computational Techniques for the Modelling, Simulation and Analysis of Biochemical Networks
: All processes of life are controlled by networks of interacting biochemical components. The purpose of modelling these networks is manifold. From a theoretical point of view it a...
James Decraene, Thomas Hinze
81
Voted
CVIU
2007
108views more  CVIU 2007»
14 years 9 months ago
A real-time hand tracker using variable-length Markov models of behaviour
We present a novel approach for visual tracking of structured behaviour as observed in human–computer interaction. An automatically acquired variable-length Markov model is used...
Nikolay Stefanov, Aphrodite Galata, Roger J. Hubbo...