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BMCBI
2010
175views more  BMCBI 2010»
14 years 10 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
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JSSPP
2010
Springer
14 years 8 months ago
Hierarchical Scheduling of DAG Structured Computations on Manycore Processors with Dynamic Thread Grouping
Many computational solutions can be expressed as directed acyclic graphs (DAGs) with weighted nodes. In parallel computing, scheduling such DAGs onto manycore processors remains a ...
Yinglong Xia, Viktor K. Prasanna, James Li