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» Research in Structural Computing
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BMCBI
2010
148views more  BMCBI 2010»
15 years 6 months ago
Structuring heterogeneous biological information using fuzzy clustering of k-partite graphs
Background: Extensive and automated data integration in bioinformatics facilitates the construction of large, complex biological networks. However, the challenge lies in the inter...
Mara L. Hartsperger, Florian Blöchl, Volker S...
BMCBI
2007
112views more  BMCBI 2007»
15 years 6 months ago
AUG_hairpin: prediction of a downstream secondary structure influencing the recognition of a translation start site
Background: The translation start site plays an important role in the control of translation efficiency of eukaryotic mRNAs. The recognition of the start AUG codon by eukaryotic r...
Alexey V. Kochetov, Andrey Palyanov, Igor I. Titov...
178
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DKE
2010
101views more  DKE 2010»
15 years 6 months ago
Effective pruning for XML structural match queries
Extensible Markup Language (XML) is becoming the de facto standard for exchanging information over the Internet, which results in the proliferation of XML documents. This has led ...
Yefei Xin, Zhen He, Jinli Cao
BIOINFORMATICS
2000
149views more  BIOINFORMATICS 2000»
15 years 6 months ago
MaxSub: an automated measure for the assessment of protein structure prediction quality
Motivation: Evaluating the accuracy of predicted models is critical for assessing structure prediction methods. Because this problem is not trivial, a large number of different as...
Naomi Siew, Arne Elofsson, Leszek Rychlewski, Dani...
SIGIR
2012
ACM
13 years 9 months ago
Optimizing positional index structures for versioned document collections
Versioned document collections are collections that contain multiple versions of each document. Important examples are Web archives, Wikipedia and other wikis, or source code and ...
Jinru He, Torsten Suel