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    BMCBI
    2010
    133views more  BMCBI 2010»
    Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical
    14 years 10 months ago
    Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical
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    Background: Many structural properties such as solvent accessibility, dihedral angles and helix-helix contacts can be assigned to each residue in a membrane protein. Independent s...
    Shandar Ahmad, Yumlembam Hemjit Singh, Yogesh Paud...
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    BMCBI
    2008
    135views more  BMCBI 2008»
    Inferring the role of transcription factors in regulatory networks
    14 years 10 months ago
    Inferring the role of transcription factors in regulatory networks
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    Background: Expression profiles obtained from multiple perturbation experiments are increasingly used to reconstruct transcriptional regulatory networks, from well studied, simple...
    Philippe Veber, Carito Guziolowski, Michel Le Borg...
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    BMCBI
    2008
    128views more  BMCBI 2008»
    Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure
    14 years 10 months ago
    Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure
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    Background: Amino acid sequence probability distributions, or profiles, have been used successfully to predict secondary structure and local structure in proteins. Profile models ...
    Christopher Bystroff, Bobbie-Jo M. Webb-Robertson
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    BMCBI
    2007
    146views more  BMCBI 2007»
    Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
    14 years 10 months ago
    Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
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    Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
    Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
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    BMCBI
    2007
    113views more  BMCBI 2007»
    CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks
    14 years 10 months ago
    CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks
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    Background: Detailed information on DNA-binding transcription factors (the key players in the regulation of gene expression) and on transcriptional regulatory interactions of micr...
    Jan Baumbach
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