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HPCN
2000
Springer
15 years 2 months ago
An Analytical Model for a Class of Architectures under Master-Slave Paradigm
We build an analytical model for an application utilizing master-slave paradigm. In the model, only three architecture parameters are used: latency, bandwidth and flop rate. Instea...
Yasemin Yalçinkaya, Trond Steihaug
145
Voted
BMCBI
2007
265views more  BMCBI 2007»
14 years 11 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
91
Voted
SPLC
2007
15 years 9 days ago
A Variability Modeling Method for Adaptable Services in Service-Oriented Computing
Publish-Discover-Compose paradigm of Service-Oriented Computing (SOC) presents a challenge on service applicability. Services are not just for predefined clients, rather for poten...
Soo Ho Chang, Soo Dong Kim
HIPC
2009
Springer
14 years 9 months ago
Comparing the performance of clusters, Hadoop, and Active Disks on microarray correlation computations
Abstract--Microarray-based comparative genomic hybridization (aCGH) offers an increasingly fine-grained method for detecting copy number variations in DNA. These copy number variat...
Jeffrey A. Delmerico, Nathanial A. Byrnes, Andrew ...
BMCBI
2008
114views more  BMCBI 2008»
14 years 11 months ago
Testing the Coulomb/Accessible Surface Area solvent model for protein stability, ligand binding, and protein design
Background: Protein structure prediction and computational protein design require efficient yet sufficiently accurate descriptions of aqueous solvent. We continue to evaluate the ...
Marcel Schmidt am Busch, Anne Lopes, Najette Amara...