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CPM
2004
Springer
108views Combinatorics» more  CPM 2004»
15 years 8 months ago
Quadratic Time Algorithms for Finding Common Intervals in Two and More Sequences
A popular approach in comparative genomics is to locate groups or clusters of orthologous genes in multiple genomes and to postulate functional association between the genes contai...
Thomas Schmidt, Jens Stoye
WSC
2004
15 years 4 months ago
A New Method to Determine the Tool Count of a Semiconductor Factory Using FabSim
Tool count optimization is mandatory for an efficiently organized semiconductor factory. This paper describes an efficient heuristic to determine the tool count using the compact ...
Holger Vogt
127
Voted
EUROPAR
2009
Springer
15 years 7 months ago
Distributed Data Partitioning for Heterogeneous Processors Based on Partial Estimation of Their Functional Performance Models
The paper presents a new data partitioning algorithm for parallel computing on heterogeneous processors. Like traditional functional partitioning algorithms, the algorithm assumes ...
Alexey L. Lastovetsky, Ravi Reddy
BMCBI
2011
14 years 6 months ago
Fusion of metabolomics and proteomics data for biomarkers discovery: case study on the experimental autoimmune encephalomyelitis
Background: Analysis of Cerebrospinal Fluid (CSF) samples holds great promise to diagnose neurological pathologies and gain insight into the molecular background of these patholog...
Lionel Blanchet, Agnieszka Smolinska, Amos Attali,...
BMCBI
2007
112views more  BMCBI 2007»
15 years 3 months ago
PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments
Background: By virtue of their shared ancestry, homologous sequences are similar in their structure and function. Consequently, multiple sequence alignments are routinely used to ...
Daniel R. Caffrey, Paul H. Dana, Vidhya Mathur, Ma...