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» Revisiting the Sequence Constraint
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BMCBI
2004
119views more  BMCBI 2004»
15 years 1 months ago
Genome SEGE: A database for 'intronless' genes in eukaryotic genomes
Background: A number of completely sequenced eukaryotic genome data are available in the public domain. Eukaryotic genes are either 'intron containing' or 'intronle...
Meena K. Sakharkar, Pandjassarame Kangueane
IJCAI
2007
15 years 3 months ago
r-grams: Relational Grams
We introduce relational grams (r-grams). They upgrade n-grams for modeling relational sequences of atoms. As n-grams, r-grams are based on smoothed n-th order Markov chains. Smoot...
Niels Landwehr, Luc De Raedt
BMCBI
2005
147views more  BMCBI 2005»
15 years 1 months ago
GATA: a graphic alignment tool for comparative sequence analysis
Background: Several problems exist with current methods used to align DNA sequences for comparative sequence analysis. Most dynamic programming algorithms assume that conserved se...
David A. Nix, Michael B. Eisen
VLDB
2002
ACM
156views Database» more  VLDB 2002»
15 years 1 months ago
A Logical Framework for Scheduling Workflows under Resource Allocation Constraints
A workflow consists of a collection of coordinated tasks designed to carry out a welldefined complex process, such as catalog ordering, trip planning, or a business process in an ...
Pinar Senkul, Michael Kifer, Ismail Hakki Toroslu
CP
2006
Springer
15 years 5 months ago
The ROOTS Constraint
A wide range of counting and occurrence constraints can be specified with just two global primitives: the Range constraint, which computes the range of values used by a sequence of...
Christian Bessière, Emmanuel Hebrard, Brahi...