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BIOINFORMATICS
2006
106views more  BIOINFORMATICS 2006»
15 years 23 days ago
Identification of biochemical networks by S-tree based genetic programming
Motivation: Most previous approaches to model biochemical networks havefocusedeither on the characterization of a networkstructurewith a number of components or on the estimation ...
Dong-Yeon Cho, Kwang-Hyun Cho, Byoung-Tak Zhang
BMCBI
2006
96views more  BMCBI 2006»
15 years 23 days ago
Bayesian detection of periodic mRNA time profiles without use of training examples
Background: Detection of periodically expressed genes from microarray data without use of known periodic and non-periodic training examples is an important problem, e.g. for ident...
Claes R. Andersson, Anders Isaksson, Mats G. Gusta...
118
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BMCBI
2007
180views more  BMCBI 2007»
15 years 21 days ago
Using expression arrays for copy number detection: an example from E. coli
Background: The sequencing of many genomes and tiling arrays consisting of millions of DNA segments spanning entire genomes have made high-resolution copy number analysis possible...
Dmitriy Skvortsov, Diana Abdueva, Michael E. Stitz...
JCB
2008
159views more  JCB 2008»
15 years 21 days ago
BayesMD: Flexible Biological Modeling for Motif Discovery
We present BayesMD, a Bayesian Motif Discovery model with several new features. Three different types of biological a priori knowledge are built into the framework in a modular fa...
Man-Hung Eric Tang, Anders Krogh, Ole Winther
115
Voted
CPHYSICS
2007
222views more  CPHYSICS 2007»
15 years 20 days ago
JADAMILU: a software code for computing selected eigenvalues of large sparse symmetric matrices
A new software code for computing selected eigenvalues and associated eigenvectors of a real symmetric matrix is described. The eigenvalues are either the smallest or those closes...
Matthias Bollhöfer, Yvan Notay
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