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» SNPs Problems, Complexity, and Algorithms
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MST
2002
169views more  MST 2002»
15 years 7 days ago
Bulk Synchronous Parallel Algorithms for the External Memory Model
Abstract. Blockwise access to data is a central theme in the design of efficient external memory (EM) algorithms. A second important issue, when more than one disk is present, is f...
Frank K. H. A. Dehne, Wolfgang Dittrich, David A. ...
DCOSS
2005
Springer
15 years 6 months ago
A Local Facility Location Algorithm for Sensor Networks
In this paper we address a well-known facility location problem (FLP) in a sensor network environment. The problem deals with finding the optimal way to provide service to a (poss...
Denis Krivitski, Assaf Schuster, Ran Wolff
BMCBI
2007
216views more  BMCBI 2007»
15 years 18 days ago
A replica exchange Monte Carlo algorithm for protein folding in the HP model
Background: The ab initio protein folding problem consists of predicting protein tertiary structure from a given amino acid sequence by minimizing an energy function; it is one of...
Chris Thachuk, Alena Shmygelska, Holger H. Hoos
115
Voted
SIAMDM
1998
89views more  SIAMDM 1998»
15 years 7 days ago
String Noninclusion Optimization Problems
For every string inclusion relation there are two optimization problems: find a longest string included in every string of a given finite language, and find a shortest string in...
Anatoly R. Rubinov, Vadim G. Timkovsky
97
Voted
JUCS
2010
117views more  JUCS 2010»
14 years 11 months ago
NP-completeness and FPT Results for Rectilinear Covering Problems
Abstract: This paper discusses three rectilinear (that is, axis-parallel) covering problems in d dimensions and their variants. The first problem is the Rectilinear Line Cover whe...
Vladimir Estivill-Castro, Apichat Heednacram, Fran...