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DATAMINE
1999
113views more  DATAMINE 1999»
13 years 6 months ago
A Fast Parallel Clustering Algorithm for Large Spatial Databases
The clustering algorithm DBSCAN relies on a density-based notion of clusters and is designed to discover clusters of arbitrary shape as well as to distinguish noise. In this paper,...
Xiaowei Xu, Jochen Jäger, Hans-Peter Kriegel
BMCBI
2011
12 years 10 months ago
MINE: Module Identification in NEtworks
Background: Graphical models of network associations are useful for both visualizing and integrating multiple types of association data. Identifying modules, or groups of function...
Kahn Rhrissorrakrai, Kristin C. Gunsalus
BMCBI
2010
139views more  BMCBI 2010»
13 years 6 months ago
A highly efficient multi-core algorithm for clustering extremely large datasets
Background: In recent years, the demand for computational power in computational biology has increased due to rapidly growing data sets from microarray and other high-throughput t...
Johann M. Kraus, Hans A. Kestler
BMCBI
2008
138views more  BMCBI 2008»
13 years 6 months ago
CASCADE: a novel quasi all paths-based network analysis algorithm for clustering biological interactions
Background: Quantitative characterization of the topological characteristics of protein-protein interaction (PPI) networks can enable the elucidation of biological functional modu...
Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...
SYRCODIS
2008
136views Database» more  SYRCODIS 2008»
13 years 7 months ago
Stochastic Approach to Binary Matrix Partitioning for Phylogenetic Networks
In this research we introduce the problem of the binary matrix partitioning in a biological context. Our idea is to use SNP matrix to construct a set of phylogenetic networks to r...
Victoria Kusherbaeva, Nikolay Vyahhi