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» SREPT: Software Reliability Estimation and Prediction Tool
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BMCBI
2004
100views more  BMCBI 2004»
14 years 9 months ago
Handling multiple testing while interpreting microarrays with the Gene Ontology Database
Background: The development of software tools that analyze microarray data in the context of genetic knowledgebases is being pursued by multiple research groups using different me...
Michael V. Osier, Hongyu Zhao, Kei-Hoi Cheung
SIGSOFT
2010
ACM
14 years 7 months ago
Language-based replay via data flow cut
A replay tool aiming to reproduce a program's execution interposes itself at an appropriate replay interface between the program and the environment. During recording, it log...
Ming Wu, Fan Long, Xi Wang, Zhilei Xu, Haoxiang Li...
BMCBI
2007
135views more  BMCBI 2007»
14 years 9 months ago
Sequence similarity is more relevant than species specificity in probabilistic backtranslation
Background: Backtranslation is the process of decoding a sequence of amino acids into the corresponding codons. All synthetic gene design systems include a backtranslation module....
Alfredo Ferro, Rosalba Giugno, Giuseppe Pigola, Al...
BMCBI
2007
160views more  BMCBI 2007»
14 years 9 months ago
Identifying protein complexes directly from high-throughput TAP data with Markov random fields
Background: Predicting protein complexes from experimental data remains a challenge due to limited resolution and stochastic errors of high-throughput methods. Current algorithms ...
Wasinee Rungsarityotin, Roland Krause, Arno Sch&ou...
80
Voted
BMCBI
2006
94views more  BMCBI 2006»
14 years 9 months ago
Fly-DPI: database of protein interactomes for D. melanogaster in the approach of systems biology
Background: Proteins control and mediate many biological activities of cells by interacting with other protein partners. This work presents a statistical model to predict protein ...
Chung-Yen Lin, Shu-Hwa Chen, Chi-Shiang Cho, Chia-...