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96
Voted
BMCBI
2010
115views more  BMCBI 2010»
14 years 11 months ago
Multiconstrained gene clustering based on generalized projections
Background: Gene clustering for annotating gene functions is one of the fundamental issues in bioinformatics. The best clustering solution is often regularized by multiple constra...
Jia Zeng, Shanfeng Zhu, Alan Wee-Chung Liew, Hong ...
122
Voted
BMCBI
2007
174views more  BMCBI 2007»
14 years 11 months ago
Inferring activity changes of transcription factors by binding association with sorted expression profiles
Background: The identification of transcription factors (TFs) associated with a biological process is fundamental to understanding its regulatory mechanisms. From microarray data,...
Chao Cheng, Xiting Yan, Fengzhu Sun, Lei M. Li
106
Voted
BMCBI
2008
135views more  BMCBI 2008»
14 years 11 months ago
Inferring the role of transcription factors in regulatory networks
Background: Expression profiles obtained from multiple perturbation experiments are increasingly used to reconstruct transcriptional regulatory networks, from well studied, simple...
Philippe Veber, Carito Guziolowski, Michel Le Borg...
SIGIR
2008
ACM
14 years 11 months ago
Relevance assessment: are judges exchangeable and does it matter
We investigate to what extent people making relevance judgements for a reusable IR test collection are exchangeable. We consider three classes of judge: "gold standard" ...
Peter Bailey, Nick Craswell, Ian Soboroff, Paul Th...
IJSN
2007
129views more  IJSN 2007»
14 years 11 months ago
Single packet IP traceback in AS-level partial deployment scenario
Tracing IP packets to their sources, known as IP traceback, is an important task in defending against IP spoofing and DoS attacks. Log-based IP traceback technique is to log pack...
Turgay Korkmaz, Chao Gong, Kamil Saraç, San...