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» Savant: genome browser for high-throughput sequencing data
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BIOINFORMATICS
2010
105views more  BIOINFORMATICS 2010»
14 years 10 months ago
Savant: genome browser for high-throughput sequencing data
Marc Fiume, Vanessa Williams, Andrew Brook, Michae...
BMCBI
2008
78views more  BMCBI 2008»
14 years 10 months ago
Genome Environment Browser (GEB): a dynamic browser for visualising high-throughput experimental data in the context of genome f
Background: There is accumulating evidence that the milieu of repeat elements and other nongenic sequence features at a given chromosomal locus, here defined as the genome environ...
Derek Huntley, Y. Amy Tang, Tatyana B. Nesterova, ...
CIDR
2009
180views Algorithms» more  CIDR 2009»
14 years 11 months ago
Data Management for High-Throughput Genomics
Today's sequencing technology allows sequencing an individual genome within a few weeks for a fraction of the costs of the original Human Genome project. Genomics labs are fa...
Uwe Röhm, José A. Blakeley
BMCBI
2011
14 years 4 months ago
PheMaDB: A solution for storage, retrieval, and analysis of high throughput phenotype data
Background: OmniLog™ phenotype microarrays (PMs) have the capability to measure and compare the growth responses of biological samples upon exposure to hundreds of growth condit...
Wenling E. Chang, Keri Sarver, Brandon W. Higgs, T...
JCB
2007
146views more  JCB 2007»
14 years 9 months ago
MSOAR: A High-Throughput Ortholog Assignment System Based on Genome Rearrangement
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...