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» Scalable Rule-Based Gene Expression Data Classification
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BMCBI
2007
116views more  BMCBI 2007»
14 years 9 months ago
Ranked Adjusted Rand: integrating distance and partition information in a measure of clustering agreement
Background: Biological information is commonly used to cluster or classify entities of interest such as genes, conditions, species or samples. However, different sources of data c...
Francisco R. Pinto, João A. Carriço,...
BMCBI
2010
138views more  BMCBI 2010»
14 years 9 months ago
UFFizi: a generic platform for ranking informative features
Background: Feature selection is an important pre-processing task in the analysis of complex data. Selecting an appropriate subset of features can improve classification or cluste...
Assaf Gottlieb, Roy Varshavsky, Michal Linial, Dav...
RECOMB
2003
Springer
15 years 9 months ago
An integrated probabilistic model for functional prediction of proteins
We develop an integrated probabilistic model to combine protein physical interactions, genetic interactions, highly correlated gene expression network, protein complex data, and d...
Minghua Deng, Ting Chen, Fengzhu Sun
KDD
2004
ACM
118views Data Mining» more  KDD 2004»
15 years 10 months ago
Parallel computation of high dimensional robust correlation and covariance matrices
The computation of covariance and correlation matrices are critical to many data mining applications and processes. Unfortunately the classical covariance and correlation matrices...
James Chilson, Raymond T. Ng, Alan Wagner, Ruben H...
CORR
2008
Springer
142views Education» more  CORR 2008»
14 years 9 months ago
A Gaussian Belief Propagation Solver for Large Scale Support Vector Machines
Support vector machines (SVMs) are an extremely successful type of classification and regression algorithms. Building an SVM entails solving a constrained convex quadratic program...
Danny Bickson, Elad Yom-Tov, Danny Dolev