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» Scalable Semantic Annotation Using Lattice-Based Ontologies
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BMCBI
2008
163views more  BMCBI 2008»
15 years 3 months ago
Gene Ontology term overlap as a measure of gene functional similarity
Background: The availability of various high-throughput experimental and computational methods allows biologists to rapidly infer functional relationships between genes. It is oft...
Meeta Mistry, Paul Pavlidis
BMCBI
2008
173views more  BMCBI 2008»
15 years 3 months ago
Extraction of semantic biomedical relations from text using conditional random fields
Background: The increasing amount of published literature in biomedicine represents an immense source of knowledge, which can only efficiently be accessed by a new generation of a...
Markus Bundschus, Mathäus Dejori, Martin Stet...
SEMWEB
2009
Springer
15 years 9 months ago
Semantically Enabled Temporal Reasoning in a Virtual Observatory
The Virtual Solar-Terrestrial Observatory (VSTO) is a distributed, scalable education and research environment for searching, integrating, and analyzing observational, experimental...
Patrick West, Eric Rozell, Stephan Zednik, Peter F...
BMCBI
2008
121views more  BMCBI 2008»
15 years 3 months ago
OntoDas - a tool for facilitating the construction of complex queries to the Gene Ontology
Background: Ontologies such as the Gene Ontology can enable the construction of complex queries over biological information in a conceptual way, however existing systems to do thi...
Kieran O'Neill, Alexander García Castro, An...
GEOS
2007
Springer
15 years 9 months ago
Algorithm, Implementation and Application of the SIM-DL Similarity Server
Abstract. Semantic similarity measurement gained attention as a methodology for ontology-based information retrieval within GIScience over the last years. Several theories explain ...
Krzysztof Janowicz, Carsten Keßler, Mirco Sc...