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» Scalable Semantic Annotation Using Lattice-Based Ontologies
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BMCBI
2008
163views more  BMCBI 2008»
14 years 10 months ago
Gene Ontology term overlap as a measure of gene functional similarity
Background: The availability of various high-throughput experimental and computational methods allows biologists to rapidly infer functional relationships between genes. It is oft...
Meeta Mistry, Paul Pavlidis
BMCBI
2008
173views more  BMCBI 2008»
14 years 10 months ago
Extraction of semantic biomedical relations from text using conditional random fields
Background: The increasing amount of published literature in biomedicine represents an immense source of knowledge, which can only efficiently be accessed by a new generation of a...
Markus Bundschus, Mathäus Dejori, Martin Stet...
SEMWEB
2009
Springer
15 years 4 months ago
Semantically Enabled Temporal Reasoning in a Virtual Observatory
The Virtual Solar-Terrestrial Observatory (VSTO) is a distributed, scalable education and research environment for searching, integrating, and analyzing observational, experimental...
Patrick West, Eric Rozell, Stephan Zednik, Peter F...
BMCBI
2008
121views more  BMCBI 2008»
14 years 10 months ago
OntoDas - a tool for facilitating the construction of complex queries to the Gene Ontology
Background: Ontologies such as the Gene Ontology can enable the construction of complex queries over biological information in a conceptual way, however existing systems to do thi...
Kieran O'Neill, Alexander García Castro, An...
GEOS
2007
Springer
15 years 4 months ago
Algorithm, Implementation and Application of the SIM-DL Similarity Server
Abstract. Semantic similarity measurement gained attention as a methodology for ontology-based information retrieval within GIScience over the last years. Several theories explain ...
Krzysztof Janowicz, Carsten Keßler, Mirco Sc...