Petascale parallel computers with more than a million processing cores are expected to be available in a couple of years. Although MPI is the dominant programming interface today ...
Pavan Balaji, Darius Buntinas, David Goodell, Will...
This paper presents GMLE 1 , a generic and distributed framework for maximum likelihood evaluation. GMLE is currently being applied to astroinformatics for determining the shape o...
Travis J. Desell, Nathan Cole, Malik Magdon-Ismail...
We characterize the performance and power attributes of the conjugate gradient (CG) sparse solver which is widely used in scientific applications. We use cycle-accurate simulatio...
Konrad Malkowski, Ingyu Lee, Padma Raghavan, Mary ...
Order-preserving submatrixes (OPSMs) have been accepted as a biologically meaningful subspace cluster model, capturing the general tendency of gene expressions across a subset of ...
Byron J. Gao, Obi L. Griffith, Martin Ester, Steve...
The de novo assembly of genomes from high-throughput short reads is an active area of research. Several promising methods have been recently developed, with applicability mainly re...
Benjamin G. Jackson, Patrick S. Schnable, Srinivas...