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BMCBI
2002
109views more  BMCBI 2002»
15 years 4 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
BMCBI
2002
120views more  BMCBI 2002»
15 years 4 months ago
tacg - a grep for DNA
Background: Pattern matching is the core of bioinformatics; it is used in database searching, restriction enzyme mapping, and finding open reading frames. It is done repeatedly ov...
Harry Mangalam
GIS
2009
ACM
16 years 6 months ago
A Case Study of Using Geographic Cues to Predict Query News Intent
Geographic information retrieval encompasses important tasks including finding the location of a user, and locations relevant to their search queries. Web-based search engines rec...
Ahmed Hassan, Rosie Jones, Fernando Diaz
162
Voted
BMCBI
2006
120views more  BMCBI 2006»
15 years 5 months ago
Projections for fast protein structure retrieval
Background: In recent times, there has been an exponential rise in the number of protein structures in databases e.g. PDB. So, design of fast algorithms capable of querying such d...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
DKE
1998
88views more  DKE 1998»
15 years 4 months ago
Temporal Grid File: A File Structure for Interval Data
Disk I/O is a major bottleneck for query processing in database applications. This bottleneck is especially a problem for temporal databases because of their large size. Reduction...
Chiang Lee, Te-Ming Tseng