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ER
2008
Springer
157views Database» more  ER 2008»
14 years 11 months ago
Retune: Retrieving and Materializing Tuple Units for Effective Keyword Search over Relational Databases
The existing approaches of keyword search over relational databases always identify the relationships between tuples on the fly, which are rather inefficient as such relational rel...
Guoliang Li, Jianhua Feng, Lizhu Zhou
PODS
2010
ACM
150views Database» more  PODS 2010»
15 years 2 months ago
Understanding queries in a search database system
It is well known that a search engine can significantly benefit from an auxiliary database, which can suggest interpretations of the search query by means of the involved concep...
Ronald Fagin, Benny Kimelfeld, Yunyao Li, Sriram R...
BIBM
2009
IEEE
206views Bioinformatics» more  BIBM 2009»
15 years 4 months ago
Application of Kernel Functions for Accurate Similarity Search in Large Chemical Databases
Background: Similaritysearch in chemical structure databases is an important problem with many applications in chemical genomics, drug design, and efficient chemical probe screeni...
Xiaohong Wang, Jun Huan, Aaron M. Smalter, Gerald ...
BMCBI
2008
108views more  BMCBI 2008»
14 years 10 months ago
A nonparametric model for quality control of database search results in shotgun proteomics
Background: Analysis of complex samples with tandem mass spectrometry (MS/MS) has become routine in proteomic research. However, validation of database search results creates a bo...
Jiyang Zhang, Jianqi Li, Xin Liu, Hongwei Xie, Yun...
BMCBI
2006
116views more  BMCBI 2006»
14 years 9 months ago
MICA: desktop software for comprehensive searching of DNA databases
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
William A. Stokes, Benjamin S. Glick