A number of biological applications require comparison of large genome strings. Current techniques suffer from both disk I/O and computational cost because of extensive memory req...
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ï...
The task of similarity search in image databases has been studied for decades, while there have been many feature extraction techniques proposed. Among the mass of low-level techni...
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
Knowledge Sifter is a scaleable agent-based system that supports access to heterogeneous information sources such as the Web, open-source repositories, XML-databases and the emergi...
Larry Kerschberg, Mizan Chowdhury, Alberto Damiano...