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CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Using Parallel Algorithms for Searching Molecular Sequence Databases
This work presents the development of algorithms for approximate string matching using parallel methods. It intends to do the maximum of molecular sequences comparisons per unity ...
Carla Correa Tavares dos Reis, Rubem P. Mondaini
HICSS
2002
IEEE
91views Biometrics» more  HICSS 2002»
15 years 2 months ago
Evaluation of User Search in a Web-Database
The number of Web-databases has exploded during the last years. In order to justify the development of new information resources, it is essential to know if the use of existing re...
Joan C. Nordbotten, Svein Nordbotten
CIVR
2008
Springer
152views Image Analysis» more  CIVR 2008»
14 years 11 months ago
FISH: a practical system for fast interactive image search in huge databases
The problem of search and retrieval of images using relevance feedback has attracted tremendous attention in recent years from the research community. A real-world-deployable inte...
Pradhee Tandon, Piyush Nigam, Vikram Pudi, C. V. J...
CSB
2003
IEEE
116views Bioinformatics» more  CSB 2003»
15 years 3 months ago
Towards Index-based Similarity Search for Protein Structure Databases
We propose two methods for finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements) of prote...
Orhan Çamoglu, Tamer Kahveci, Ambuj K. Sing...
BMCBI
2006
172views more  BMCBI 2006»
14 years 10 months ago
A novel scoring schema for peptide identification by searching protein sequence databases using tandem mass spectrometry data
Background: Tandem mass spectrometry (MS/MS) is a powerful tool for protein identification. Although great efforts have been made in scoring the correlation between tandem mass sp...
Zhuo Zhang, Shiwei Sun, Xiaopeng Zhu, Suhua Chang,...