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» Searching on the Secondary Structure of Protein Sequences
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86
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JUCS
2010
104views more  JUCS 2010»
14 years 8 months ago
Investigating a Correlation between Subcellular Localization and Fold of Proteins
: When considering the prediction of a structural class for a protein as a classification problem, usually a classifier is based on a feature vector x ∈ Rn , where the features...
Johannes Aßfalg, Jing Gong, Hans-Peter Krieg...
BMCBI
2006
120views more  BMCBI 2006»
14 years 9 months ago
Classification of protein quaternary structure by functional domain composition
Background: The number and the arrangement of subunits that form a protein are referred to as quaternary structure. Quaternary structure is an important protein attribute that is ...
Xiaojing Yu, Chuan Wang, Yixue Li
53
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PSB
2004
14 years 11 months ago
ProGreSS: Simultaneous Searching of Protein Databases by Sequence and Structure
Arnab Bhattacharya, Tolga Can, Tamer Kahveci, Ambu...
62
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BIOINFORMATICS
2010
94views more  BIOINFORMATICS 2010»
14 years 9 months ago
Globally, unrelated protein sequences appear random
Motivation: To test whether protein folding constraints and secondary structure sequence preferences significantly reduce the space of amino acid words in proteins, we compared th...
Daniel T. Lavelle, William R. Pearson
93
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CIKM
2009
Springer
15 years 4 months ago
Linear predictive coding representation of correlated mutation for protein sequence alignment
Background: Although both conservation and correlated mutation (CM) are important information reflecting the different sorts of context in multiple sequence alignment, most of ali...
Chan-seok Jeong, Dongsup Kim