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BMCBI
2006
129views more  BMCBI 2006»
14 years 12 months ago
Fast index based algorithms and software for matching position specific scoring matrices
Background: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as amino acid sequences....
Michael Beckstette, Robert Homann, Robert Giegeric...
CEC
2010
IEEE
15 years 28 days ago
Beyond No Free Lunch: Realistic algorithms for arbitrary problem classes
In this paper we present a simple and general new No Free Lunch-like result that applies to revisiting algorithms searching arbitrary problem sets. We begin by unifying the assumpt...
James A. R. Marshall, Thomas G. Hinton
BMCBI
2010
91views more  BMCBI 2010»
14 years 12 months ago
Ranked retrieval of Computational Biology models
Background: The study of biological systems demands computational support. If targeting a biological problem, the reuse of existing computational models can save time and effort. ...
Ron Henkel, Lukas Endler, Andre Peters, Nicolas Le...
SIGMOD
2009
ACM
218views Database» more  SIGMOD 2009»
16 years 1 days ago
Exploring biomedical databases with BioNav
We demonstrate the BioNav system, a novel search interface for biomedical databases, such as PubMed. BioNav enables users to navigate large number of query results by categorizing...
Abhijith Kashyap, Vagelis Hristidis, Michalis Petr...
AI
2007
Springer
15 years 6 months ago
Learning the Semantic Meaning of a Concept from the Web
Many researchers have used text classification method in solving the ontology mapping problem. Their mapping results heavily depend on the availability of quality exemplars used as...
Yang Yu, Yun Peng