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BIBE
2006
IEEE
119views Bioinformatics» more  BIBE 2006»
15 years 5 months ago
Large Grain Size Stochastic Optimization Alignment
DNA sequence alignment is a critical step in identifying homology between organisms. The most widely used alignment program, ClustalW, is known to suffer from the local minima pro...
Perry Ridge, Hyrum Carroll, Dan Sneddon, Mark J. C...
KDD
2010
ACM
197views Data Mining» more  KDD 2010»
14 years 9 months ago
Semi-supervised feature selection for graph classification
The problem of graph classification has attracted great interest in the last decade. Current research on graph classification assumes the existence of large amounts of labeled tra...
Xiangnan Kong, Philip S. Yu
TIP
1998
142views more  TIP 1998»
14 years 11 months ago
Inversion of large-support ill-posed linear operators using a piecewise Gaussian MRF
Abstract—We propose a method for the reconstruction of signals and images observed partially through a linear operator with a large support (e.g., a Fourier transform on a sparse...
Mila Nikolova, Jérôme Idier, Ali Moha...
RECOMB
2009
Springer
16 years 13 days ago
Parameter Synthesis in Nonlinear Dynamical Systems: Application to Systems Biology
The dynamics of biological processes are often modeled as systems of nonlinear ordinary differential equations (ODE). An important feature of nonlinear ODEs is that seemingly minor...
Alexandre Donzé, Gilles Clermont, Axel Lega...
SIGIR
2009
ACM
15 years 6 months ago
Reducing long queries using query quality predictors
Long queries frequently contain many extraneous terms that hinder retrieval of relevant documents. We present techniques to reduce long queries to more effective shorter ones tha...
Giridhar Kumaran, Vitor R. Carvalho