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» Selection of DNA Markers
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BMCBI
2006
94views more  BMCBI 2006»
14 years 9 months ago
Dynamic variable selection in SNP genotype autocalling from APEX microarray data
Background: Single nucleotide polymorphisms (SNPs) are DNA sequence variations, occurring when a single nucleotide
Mohua Podder, William J. Welch, Ruben H. Zamar, Sc...
PRIB
2010
Springer
123views Bioinformatics» more  PRIB 2010»
14 years 8 months ago
Machine Learning Study of DNA Binding by Transcription Factors from the LacI Family
We studied 1372 LacI-family transcription factors and their 4484 DNA binding sites using machine learning algorithms and feature selection techniques. The Naive Bayes classifier a...
Gennady G. Fedonin, Mikhail S. Gelfand
ICCD
2003
IEEE
147views Hardware» more  ICCD 2003»
15 years 6 months ago
Design Flow Enhancements for DNA Arrays
DNA probe arrays have recently emerged as one of the core genomic technologies. Exploiting analogies between manufacturing processes for DNA arrays and for VLSI chips, we demonstr...
Andrew B. Kahng, Ion I. Mandoiu, Sherief Reda, Xu ...
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DAC
2006
ACM
15 years 10 months ago
Design automation for DNA self-assembled nanostructures
DNA self-assembly is an emerging technology with potential as a future replacement of conventional lithographic fabrication. A key challenge is the specification of appropriate DN...
Constantin Pistol, Alvin R. Lebeck, Chris Dwyer
KBSE
2008
IEEE
15 years 4 months ago
Rhizome: A Feature Modeling and Generation Platform
Rhizome is an end-to-end feature modeling and code generation platform that includes a feature modeling language (FeatureML), a template language (MarkerML) and a template-based c...
Guozheng Ge, E. James Whitehead Jr.