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» Selection of DNA Markers
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BMCBI
2004
128views more  BMCBI 2004»
14 years 9 months ago
Comparing transformation methods for DNA microarray data
Background: When DNA microarray data are used for gene clustering, genotype/phenotype correlation studies, or tissue classification the signal intensities are usually transformed ...
Helene H. Thygesen, Aeilko H. Zwinderman
BMCBI
2007
158views more  BMCBI 2007»
14 years 9 months ago
Penalized likelihood for sparse contingency tables with an application to full-length cDNA libraries
Background: The joint analysis of several categorical variables is a common task in many areas of biology, and is becoming central to systems biology investigations whose goal is ...
Corinne Dahinden, Giovanni Parmigiani, Mark C. Eme...
BMCBI
2008
154views more  BMCBI 2008»
14 years 9 months ago
GenomeMatcher: A graphical user interface for DNA sequence comparison
Background: The number of available genome sequences is increasing, and easy-to-use software that enables efficient comparative analysis is needed. Results: We developed GenomeMat...
Yoshiyuki Ohtsubo, Wakako Ikeda-Ohtsubo, Yuji Naga...
BMCBI
2007
190views more  BMCBI 2007»
14 years 9 months ago
Discriminative motif discovery in DNA and protein sequences using the DEME algorithm
Background: Motif discovery aims to detect short, highly conserved patterns in a collection of unaligned DNA or protein sequences. Discriminative motif finding algorithms aim to i...
Emma Redhead, Timothy L. Bailey
IJON
2006
95views more  IJON 2006»
14 years 9 months ago
Ensemble classifiers based on correlation analysis for DNA microarray classification
Since accurate classification of DNA microarray is a very important issue for the treatment of cancer, it is more desirable to make a decision by combining the results of various ...
Kyung-Joong Kim, Sung-Bae Cho