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BMCBI
2008
111views more  BMCBI 2008»
14 years 9 months ago
GENOMEPOP: A program to simulate genomes in populations
Background: There are several situations in population biology research where simulating DNA sequences is useful. Simulation of biological populations under different evolutionary...
Antonio Carvajal-Rodríguez
BMCBI
2010
93views more  BMCBI 2010»
14 years 9 months ago
JunctionViewer: customizable annotation software for repeat-rich genomic regions
Background: Repeat-rich regions such as centromeres receive less attention than their gene-rich euchromatic counterparts because the former are difficult to assemble and analyze. ...
Thomas K. Wolfgruber, Gernot G. Presting
ISMIS
2003
Springer
15 years 2 months ago
Evolutionary Computation for Optimal Ensemble Classifier in Lymphoma Cancer Classification
Owing to the development of DNA microarray technologies, it is possible to get thousands of expression levels of genes at once. If we make the effective classification system with ...
Chanho Park, Sung-Bae Cho
BMCBI
2010
134views more  BMCBI 2010»
14 years 9 months ago
R-Gada: a fast and flexible pipeline for copy number analysis in association studies
Background: Genome-wide association studies (GWAS) using Copy Number Variation (CNV) are becoming a central focus of genetic research. CNVs have successfully provided target genom...
Roger Pique-Regi, Alejandro Cáceres, Juan R...
BMCBI
2006
109views more  BMCBI 2006»
14 years 9 months ago
An integrated system for genetic analysis
Background: Large-scale genetic mapping projects require data management systems that can handle complex phenotypes and detect and correct high-throughput genotyping errors, yet a...
Simon Fiddy, David Cattermole, Dong Xie, Xiao Yuan...