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» Semantic Mining and Analysis of Gene Expression Data
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BMCBI
2007
151views more  BMCBI 2007»
14 years 10 months ago
A statistical method to incorporate biological knowledge for generating testable novel gene regulatory interactions from microar
Background: The incorporation of prior biological knowledge in the analysis of microarray data has become important in the reconstruction of transcription regulatory networks in a...
Peter Larsen, Eyad Almasri, Guanrao Chen, Yang Dai
BMCBI
2007
237views more  BMCBI 2007»
14 years 10 months ago
FLAME, a novel fuzzy clustering method for the analysis of DNA microarray data
Background: Data clustering analysis has been extensively applied to extract information from gene expression profiles obtained with DNA microarrays. To this aim, existing cluster...
Limin Fu, Enzo Medico
KDD
2006
ACM
139views Data Mining» more  KDD 2006»
15 years 10 months ago
Generating semantic annotations for frequent patterns with context analysis
As a fundamental data mining task, frequent pattern mining has widespread applications in many different domains. Research in frequent pattern mining has so far mostly focused on ...
Qiaozhu Mei, Dong Xin, Hong Cheng, Jiawei Han, Che...
BMCBI
2005
163views more  BMCBI 2005»
14 years 10 months ago
Rank-invariant resampling based estimation of false discovery rate for analysis of small sample microarray data
Background: The evaluation of statistical significance has become a critical process in identifying differentially expressed genes in microarray studies. Classical p-value adjustm...
Nitin Jain, HyungJun Cho, Michael O'Connell, Jae K...
CORR
2010
Springer
111views Education» more  CORR 2010»
14 years 7 months ago
Analysis Of Cancer Omics Data In A Semantic Web Framework
Our work concerns the elucidation of the cancer (epi)genome, transcriptome and proteome to better understand the complex interplay between a cancer cell's molecular state and ...
Matthew Holford, James P. McCusker, Kei-Hoi Cheung...