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» Semantic Mining and Analysis of Gene Expression Data
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SIGKDD
2010
136views more  SIGKDD 2010»
14 years 4 months ago
Tenth international workshop on multimedia data mining
In this report we provide a summary of the tenth Multimedia Data Mining Workshop that was held in conjunction with the 16th ACM SIGKDD International Conference on Knowledge Discov...
Valery A. Petrushin, Jia-Yu Pan, Cees G. M. Snoek
BMCBI
2010
97views more  BMCBI 2010»
14 years 10 months ago
Biomarker discovery in heterogeneous tissue samples -taking the in-silico deconfounding approach
Background: For heterogeneous tissues, such as blood, measurements of gene expression are confounded by relative proportions of cell types involved. Conclusions have to rely on es...
Dirk Repsilber, Sabine Kern, Anna Telaar, Gerhard ...
BMCBI
2008
94views more  BMCBI 2008»
14 years 10 months ago
A comprehensive re-analysis of the Golden Spike data: Towards a benchmark for differential expression methods
Background: The Golden Spike data set has been used to validate a number of methods for summarizing Affymetrix data sets, sometimes with seemingly contradictory results. Much less...
Richard D. Pearson
EVOW
2005
Springer
15 years 3 months ago
Order Preserving Clustering over Multiple Time Course Experiments
Abstract. Clustering still represents the most commonly used technique to analyze gene expression data—be it classical clustering approaches that aim at finding biologically rel...
Stefan Bleuler, Eckart Zitzler
BIOSYSTEMS
2008
75views more  BIOSYSTEMS 2008»
14 years 10 months ago
Using matrix of thresholding partial correlation coefficients to infer regulatory network
DNA arrays measure the expression levels for thousands of genes simultaneously under different conditions. These measurements reflect many aspects of the underlying biological pro...
Lide Han, Jun Zhu